BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F03LP1|AL429595
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1626 0.0
>3x_Contig1746
Length = 26672
Score = 1626 bits (815), Expect = 0.0
Identities = 829/837 (99%), Gaps = 1/837 (0%)
Strand = Plus / Plus
Query: 4 gattttgaattaaaga-ttttttgtgttctaatcctcggtgtgctagtatcgacaactca 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gattttgaattaaagaattttttgtgttctaatcctcggtgtgctagtatcgacaactca 764
Query: 63 cttctaaaatgatgcaactacctactgaattggtgtctgatttggggacttaccaattaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 cttctaaaatgatgcaactacctactgaattggtgtctgatttggggacttaccaattaa 824
Query: 123 matctattttagggaatgataaaggaaatgtaatatattgtgcgaagaattctaacggct 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 aatctattttagggaatgataaaggaaatgtaatatattgtgcgaagaattctaacggct 884
Query: 183 ctactgttgttttgattgagaccgacaaagttcttccggtgaaggctaagacgaggttgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ctactgttgttttgattgagaccgacaaagttcttccggtgaaggctaagacgaggttgg 944
Query: 243 atgatacttataaggmcagattctatgataaggatcatacgamaacctttaccgtttatg 302
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 945 atgatacttataaggacagattctatgataaggatcatacgaaaacctttaccgtttatg 1004
Query: 303 gtcaagactatctggatattgaaggaaacgactactttgcatactcaactgatgaggatc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 gtcaagactatctggatattgaaggaaacgactactttgcatactcaactgatgaggatc 1064
Query: 363 actcgttaaagtcacgtgatagtmatgaatctcatcatgagaatgaacaatgtaaccatc 422
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1065 actcgttaaagtcacgtgatagtaatgaatctcatcatgagaatgaacaatgtaaccatc 1124
Query: 423 atacgcaggagaaagaggagcagcttgatgctgaaagtcaacacatttgttttaatggaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 atacgcaggagaaagaggagcagcttgatgctgaaagtcaacacatttgttttaatggaa 1184
Query: 483 gtgcggagatgaagccatgtaacaatattttggctagaatgamatgcaaactgggactac 542
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1185 gtgcggagatgaagccatgtaacaatattttggctagaatgaaatgcaaactgggactac 1244
Query: 543 gaaccccaatgatgaaagtcgttccaccggcaagggatgaggatgaagatgaggatgaag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 gaaccccaatgatgaaagtcgttccaccggcaagggatgaggatgaagatgaggatgaag 1304
Query: 603 accaagatgaaactatcgaagaatctgacgataatgataatmatgctgatgattcagtgt 662
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1305 accaagatgaaactatcgaagaatctgacgataatgataataatgctgatgattcagtgt 1364
Query: 663 cagatttaccggatataatattmccccagactaccgttccaaaagcaattgagaaaccaa 722
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1365 cagatttaccggatataatattaccccagactaccgttccaaaagcaattgagaaaccaa 1424
Query: 723 cctcaattctcgataaatcaactcatcttagagcatcaatttgcatatctgacaatgtac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 cctcaattctcgataaatcaactcatcttagagcatcaatttgcatatctgacaatgtac 1484
Query: 783 ggcttgctccttgtgggaagaagcggattgtcagccttccgagaacgccaataccaa 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 ggcttgctccttgtgggaagaagcggattgtcagccttccgagaacgccaataccaa 1541
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6222
Number of Sequences: 1807
Number of extensions: 6222
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)